ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-320
source: miRBase, original name: ptr-mir-320a (MI0008607)
SEQUENCE & STRUCTURE| miRNA AAAAGCTGGGTTGAGAGGGCGA miRNA* GCCTTCTCTTCCCGGTTCTTCC mismatches: 4 bulges: 0 |
pre-miRNA
GCTTCGCTCCTCTCCGCCTTCTCTTCCCGGTTCTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATGAGG
dot-bracket secondary structure
.(((((.((((...(((((((((..(((((((.((((((....)))))).)))))))..)))))))))....)))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCTTCGCTCCTCTCCGCCTTCTCTTCCCGGTTCTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATGAGG
dot-bracket secondary structure
.(((((.((((...(((((((((..(((((((.((((((....)))))).)))))))..)))))))))....)))))))))
SIMILARITIES| miRBase mml-mir-320: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-320: 1e-34 |
Identical with: cfa-mir-320 from miRBase (MNEST026794) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
