ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-320
source: miRBase, original name: ptr-mir-320b-1 (MI0008608)
SEQUENCE & STRUCTURE| miRNA AAAAGCTGGGTTGAGAGGGCAA miRNA* TCCCTCTCTTTCTAGTTCTTCC mismatches: 6 bulges: 0 |
pre-miRNA
AATTAATCCCTCTCTTTCTAGTTCTTCCTAGAGTGAGGAAAAGCTGGGTTGAGAGGGCAAACAAATTAACTAATTAAT
dot-bracket secondary structure
.......(((((((..(((((((.(((((......))))).)))))))..))))))).....................
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AATTAATCCCTCTCTTTCTAGTTCTTCCTAGAGTGAGGAAAAGCTGGGTTGAGAGGGCAAACAAATTAACTAATTAAT
dot-bracket secondary structure
.......(((((((..(((((((.(((((......))))).)))))))..))))))).....................
SIMILARITIES| miRBase hsa-mir-320b-1: 5e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-320: 2e-32 |
Identical with: hsa-mir-320b-1 from miRBase (MNEST028562) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
