ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-328
source: miRBase, original name: ptr-mir-328 (MI0008618)
SEQUENCE & STRUCTURE| miRNA CTGGCCCTCTCTGCCCTTCCGT miRNA* GGGGGGGCAGGAGGGGCTCAGGG mismatches: 3 bulges: 1 |
pre-miRNA
TGGAGTGGGGGGGCAGGAGGGGCTCAGGGAGAAAGTGCATACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCT
dot-bracket secondary structure
.((..(((((((((((..(((((.(((((.(...((....))..)))))))))))..)))))))))))..))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGGAGTGGGGGGGCAGGAGGGGCTCAGGGAGAAAGTGCATACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCT
dot-bracket secondary structure
.((..(((((((((((..(((((.(((((.(...((....))..)))))))))))..)))))))))))..))..
SIMILARITIES| miRBase hsa-mir-328: 7e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-328: 1e-27 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
