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ABOUT THIS RECORD

ID: MNEST030336
species: Pan troglodytes
miRNA family: mir-340
source: miRBase, original name: ptr-mir-340 (MI0008628)







SEQUENCE & STRUCTURE
miRNA
TTATAAAGCAATGAGACTGATT

miRNA*
TCCGTCTCAGTTACTTTATAGCC

mismatches: 5
bulges: 1

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pre-miRNA
TTGTACCTGGTGTGATTATAAAGCAATGAGACTGATTGTCATATGTCGTTTGTGGGATCCGTCTCAGTTACTTTATAGCCATACCTGGTATCTT

dot-bracket secondary structure
..(((((.((((((..(((((((...((((((.((((.(((((.......))))))))).))))))....)))))))..)))))).)))))...


SIMILARITIES
miRBase hsa-mir-340: 2e-48

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-340: 2e-42

Identical with: ssc-mir-340 from miRBase (MNEST034064)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




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