ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-346
source: miRBase, original name: ptr-mir-346 (MI0008631)
SEQUENCE & STRUCTURE| miRNA TGTCTGCCCGCATGCCTGCCTCT miRNA* AGGCAGGGGCTGGGCCTGCAGC mismatches: 4 bulges: 3 |
pre-miRNA
GGTCTCTGTGTTGGGCGTCTGTCTGCCCGCATGCCTGCCTCTCTGTTGCTCTGAAGGAGGCAGGGGCTGGGCCTGCAGCTGCCTGGGCAGAGCG
dot-bracket secondary structure
.(.((((((.(..((((.((((..((((((...((((((((.((..........)))))))))).)).))))..)))).))))..)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGTCTCTGTGTTGGGCGTCTGTCTGCCCGCATGCCTGCCTCTCTGTTGCTCTGAAGGAGGCAGGGGCTGGGCCTGCAGCTGCCTGGGCAGAGCG
dot-bracket secondary structure
.(.((((((.(..((((.((((..((((((...((((((((.((..........)))))))))).)).))))..)))).))))..)))))))).
SIMILARITIES| miRBase eca-mir-346: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-346: 5e-37 |
Identical with: eca-mir-346 from miRBase (MNEST027139) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
