ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-365
source: miRBase, original name: ptr-mir-365-2 (MI0008637)
SEQUENCE & STRUCTURE| miRNA TAATGCCCCTAAAAATCCTTAT miRNA* GAGGGACTTTCTGGGGCAGCTGT mismatches: 6 bulges: 1 |
pre-miRNA
AGAGTGTTCAAGGATAGCAAGAAAAATGAGGGACTTTCTGGGGCAGCTGTGTTTTCTGACTTAGTCTTAATGCCCCTAAAAATCCTTATTGTTCTTGCAG
TGTGCATCGG
dot-bracket secondary structure
.((.(((.((......(((((((.((((((((..(((..((((((((((.(((....))).)))).....))))))..))).)))))))).)))))))..
)).)))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGAGTGTTCAAGGATAGCAAGAAAAATGAGGGACTTTCTGGGGCAGCTGTGTTTTCTGACTTAGTCTTAATGCCCCTAAAAATCCTTATTGTTCTTGCAG
TGTGCATCGG
dot-bracket secondary structure
.((.(((.((......(((((((.((((((((..(((..((((((((((.(((....))).)))).....))))))..))).)))))))).)))))))..
)).)))))..
SIMILARITIES| miRBase cfa-mir-365-2: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-365: 8e-33 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
