ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-290
source: miRBase, original name: ptr-mir-372 (MI0008642)
SEQUENCE & STRUCTURE| miRNA AAAGTGCTGCGACATTTGAGCGT miRNA* CTCAAATGTGGAGCACTATTCT mismatches: 1 bulges: 3 |
pre-miRNA
TGGGCCTCAAATGTGGAGCACTATTCTGATGTCCAAGTGGAAAGTGCTGCGACATTTGAGCGTCAC
dot-bracket secondary structure
..((((((((((((.(((((((.((((...........)))))))))).).))))))))).)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGGGCCTCAAATGTGGAGCACTATTCTGATGTCCAAGTGGAAAGTGCTGCGACATTTGAGCGTCAC
dot-bracket secondary structure
..((((((((((((.(((((((.((((...........)))))))))).).))))))))).)))..
SIMILARITIES| miRBase hsa-mir-372: 6e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-290: 6e-23 |
Identical with: hsa-mir-372 from miRBase (MNEST028611) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
