ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-374
source: miRBase, original name: ptr-mir-374b (MI0008644)
SEQUENCE & STRUCTURE| miRNA ATATAATACAACCTGCTAAGTG miRNA* CTTAGCAGGTTGTATTATCATT mismatches: 2 bulges: 0 |
pre-miRNA
ACTCGGATGGATATAATACAACCTGCTAAGTGTCCTAGCACTTAGCAGGTTGTATTATCATTGTCCGTGTC
dot-bracket secondary structure
((.((((..(..(((((((((((((((((((((....)))))))))))))))))))))..)..)))).)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ACTCGGATGGATATAATACAACCTGCTAAGTGTCCTAGCACTTAGCAGGTTGTATTATCATTGTCCGTGTC
dot-bracket secondary structure
((.((((..(..(((((((((((((((((((((....)))))))))))))))))))))..)..)))).)).
SIMILARITIES| miRBase mml-mir-374b: 7e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-374: 2e-26 |
Identical with: hsa-mir-374b from miRBase (MNEST028614) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
