ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-375
source: miRBase, original name: ptr-mir-375 (MI0008645)
SEQUENCE & STRUCTURE| miRNA TTTGTTCGTTCGGCTCGCGTGA miRNA* GCGACGAGCCCCTCGCACAAACC mismatches: 5 bulges: 1 |
pre-miRNA
CCCCGCGACGAGCCCCTCGCACAAACCGGACCTGAGCGTTTTGTTCGTTCGGCTCGCGTGAGG
dot-bracket secondary structure
.((((((.((((((...((.(((((.((........)).))))).))...)))))))))).))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCCCGCGACGAGCCCCTCGCACAAACCGGACCTGAGCGTTTTGTTCGTTCGGCTCGCGTGAGG
dot-bracket secondary structure
.((((((.((((((...((.(((((.((........)).))))).))...)))))))))).))
SIMILARITIES| miRBase cfa-mir-375: 4e-30 PMRD no hits microPC no hits | UniProt no hits RFAM mir-375: 6e-26 |
Identical with: hsa-mir-375 from miRBase (MNEST028616) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
