ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-368
source: miRBase, original name: ptr-mir-376a-1 (MI0008646)
SEQUENCE & STRUCTURE| miRNA ATCATAGAGGAAAATCCACGT miRNA* GTAGATTCTCCTTCTATGAGTA mismatches: 4 bulges: 1 |
pre-miRNA
AAAAGGTAGATTCTCCTTCTATGAGTACATTATTTATGATTAATCATAGAGGAAAATCCACGTTTTC
dot-bracket secondary structure
((((.((.((((.((((.((((((...(((.....))).....)))))))))).)))).)).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AAAAGGTAGATTCTCCTTCTATGAGTACATTATTTATGATTAATCATAGAGGAAAATCCACGTTTTC
dot-bracket secondary structure
((((.((.((((.((((.((((((...(((.....))).....)))))))))).)))).)).)))).
SIMILARITIES| miRBase mml-mir-376a-1: 2e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 3e-31 |
Identical with: hsa-mir-376a-1 from miRBase (MNEST028617) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
