ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-368
source: miRBase, original name: ptr-mir-376b (MI0008648)
SEQUENCE & STRUCTURE| miRNA ATCATAGAGGAAAATCCATGTT miRNA* CGTGGATATTCCTTCTATGTTTA mismatches: 3 bulges: 1 |
pre-miRNA
AGTCCTTCTTTGGTATTTAAAACGTGGATATTCCTTCTATGTTTACGTGATTCCTGGTTAATCATAGAGGAAAATCCATGTTTTCAGTATCAAATGCTG
dot-bracket secondary structure
........(((((((((.(((((((((((.(((((.(((((......((((.....))))..)))))))))).))))))))))).))))))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGTCCTTCTTTGGTATTTAAAACGTGGATATTCCTTCTATGTTTACGTGATTCCTGGTTAATCATAGAGGAAAATCCATGTTTTCAGTATCAAATGCTG
dot-bracket secondary structure
........(((((((((.(((((((((((.(((((.(((((......((((.....))))..)))))))))).))))))))))).))))))))).....
SIMILARITIES| miRBase mml-mir-376b: 2e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 1e-31 |
Identical with: hsa-mir-376b from miRBase (MNEST028619) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
