ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-368
source: miRBase, original name: ptr-mir-376c (MI0008649)
SEQUENCE & STRUCTURE| miRNA AACATAGAGGAAATTCCACGT miRNA* GTGGATATTCCTTCTATGTTTA mismatches: 3 bulges: 1 |
pre-miRNA
AAAGGTGGATATTCCTTCTATGTTTATGTTATTTATGGTTAAACATAGAGGAAATTCCACGTTTT
dot-bracket secondary structure
(((.(((((..(((((.(((((((((.............))))))))))))))..))))).))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AAAGGTGGATATTCCTTCTATGTTTATGTTATTTATGGTTAAACATAGAGGAAATTCCACGTTTT
dot-bracket secondary structure
(((.(((((..(((((.(((((((((.............))))))))))))))..))))).))).
SIMILARITIES| miRBase cfa-mir-376c: 2e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 1e-27 |
Identical with: cfa-mir-376c from miRBase (MNEST026827) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
