ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-154
source: miRBase, original name: ptr-mir-377 (MI0008650)
SEQUENCE & STRUCTURE| miRNA ATCACACAAAGGCAACTTTTGT miRNA* AGAGGTTGCCCTTGGTGAATTC mismatches: 1 bulges: 2 |
pre-miRNA
TGAGCAGAGGTTGCCCTTGGTGAATTCGCTTTATTTATGTTGAATCACACAAAGGCAACTTTTGTTTG
dot-bracket secondary structure
.((((((((((((((.(((((((.(((((.........).)))))))).))).)))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGAGCAGAGGTTGCCCTTGGTGAATTCGCTTTATTTATGTTGAATCACACAAAGGCAACTTTTGTTTG
dot-bracket secondary structure
.((((((((((((((.(((((((.(((((.........).)))))))).))).)))))))))))))).
SIMILARITIES| miRBase cfa-mir-377: 4e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 7e-32 |
Identical with: bta-mir-377 from miRBase (MNEST033352) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
