ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-383
source: miRBase, original name: ptr-mir-383 (MI0008656)
SEQUENCE & STRUCTURE| miRNA AGATCAGAAGGTGATTGTGGCT miRNA* CCACAGCACTGCCTGGTCAGA mismatches: 3 bulges: 1 |
pre-miRNA
ACTCCTCAGATCAGAAGGTGATTGTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGA
dot-bracket secondary structure
).......((((((..((((.((((((((...(((........)))))))))))))))..)))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ACTCCTCAGATCAGAAGGTGATTGTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGA
dot-bracket secondary structure
).......((((((..((((.((((((((...(((........)))))))))))))))..)))))).......
SIMILARITIES| miRBase eca-mir-383: 2.0E-35 PMRD no hits microPC no hits | UniProt no hits RFAM 3mir-383: 1.0E-24 |
Identical with: cfa-mir-383 from miRBase (MNEST026834), ppy-mir-383 from miRBase , hsa-mir-383 from miRBase , mml-mir-383 from miRBase , eca-mir-383 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
