ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-154
source: miRBase, original name: ptr-mir-410 (MI0008658)
SEQUENCE & STRUCTURE| miRNA AATATAACACAGATGGCCTGT miRNA* AGGTTGTCTGTGATGAGTTCG mismatches: 5 bulges: 0 |
pre-miRNA
GTACCTGAGAAGAGGTTGTCTGTGATGAGTTCGCTTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACC
dot-bracket secondary structure
((((.((((((.((((..((((((.((.((((((..........).))))).)).))))))..)))).)))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GTACCTGAGAAGAGGTTGTCTGTGATGAGTTCGCTTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACC
dot-bracket secondary structure
((((.((((((.((((..((((((.((.((((((..........).))))).)).))))))..)))).)))))))))).
SIMILARITIES| miRBase hsa-mir-410: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 8e-26 |
Identical with: ppy-mir-410 from miRBase (MNEST030994) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
