ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-433
source: miRBase, original name: ptr-mir-433 (MI0008668)
SEQUENCE & STRUCTURE| miRNA ATCATGATGGGCTCCTCGGTGT miRNA* TACGGTGAGCCTGTCATTATTC mismatches: 5 bulges: 0 |
pre-miRNA
CGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGG
dot-bracket secondary structure
...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGG
dot-bracket secondary structure
...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...))))))...
SIMILARITIES| miRBase hsa-mir-433: 3e-47 PMRD no hits microPC no hits | UniProt sp|Q7M732|RTL1_MOUSE: 0.000000002 RFAM mir-433: 5e-46 |
Identical with: hsa-mir-433 from miRBase (MNEST028652) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
