ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-455
source: miRBase, original name: ptr-mir-455 (MI0008679)
SEQUENCE & STRUCTURE| miRNA GCAGTCCATGGGCATATACAC miRNA* GTATGTGCCTTTGGACTACAT mismatches: 4 bulges: 0 |
pre-miRNA
CCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTATGTCATC
dot-bracket secondary structure
)....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTATGTCATC
dot-bracket secondary structure
)....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).........
SIMILARITIES| miRBase mml-mir-455: 5.0E-49 PMRD no hits microPC no hits | UniProt no hits RFAM 5mir-455: 5.0E-37 |
Identical with: hsa-mir-455 from miRBase (MNEST028666), ssc-mir-455 from miRBase , mml-mir-455 from miRBase , cfa-mir-455 from miRBase , ppy-mir-455 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
