ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-515
source: miRBase, original name: ptr-mir-526a-1 (MI0008737)
SEQUENCE & STRUCTURE| miRNA CTCTAGAGGGAAGCACTTTCTG miRNA* GAAAGCGCTTCCTTTTAGAGGA mismatches: 2 bulges: 0 |
pre-miRNA
TCAGGCTGTGACCCTCTAGAGGGAAGCACTTTCTGTTGCTTGAAAGAAGAGAAAGCGCTTCCTTTTAGAGGATTACTCTTTGAG
dot-bracket secondary structure
(((((..((((.(((((((((((((((.((((((.((.((....)))).)))))).))))))))))))))).))))..))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TCAGGCTGTGACCCTCTAGAGGGAAGCACTTTCTGTTGCTTGAAAGAAGAGAAAGCGCTTCCTTTTAGAGGATTACTCTTTGAG
dot-bracket secondary structure
(((((..((((.(((((((((((((((.((((((.((.((....)))).)))))).))))))))))))))).))))..))))).
SIMILARITIES| miRBase hsa-mir-526a-1: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-515: 7e-39 |
Identical with: hsa-mir-526a-1 from miRBase (MNEST028781) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
