ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-548
source: miRBase, original name: ptr-mir-548f-2 (MI0008751)
SEQUENCE & STRUCTURE| miRNA AAAAACTGTAATTACTTTT miRNA* ACCTAATTGCAATTTTTGC mismatches: 3 bulges: 0 |
pre-miRNA
ATTAGGTTGGTGCAAACCTAATTGCAATTTTTGCAGTTTTTTTAAGTAATTGCAAAAACTGTAATTACTTTTGCACCAACCTAATA
dot-bracket secondary structure
((((((((((((((((..((((((((.(((((((((((.........))))))))))).))))))))..)))))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ATTAGGTTGGTGCAAACCTAATTGCAATTTTTGCAGTTTTTTTAAGTAATTGCAAAAACTGTAATTACTTTTGCACCAACCTAATA
dot-bracket secondary structure
((((((((((((((((..((((((((.(((((((((((.........))))))))))).))))))))..)))))))))))))))).
SIMILARITIES| miRBase hsa-mir-548f-3: 3e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-548: 0.00000000008 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
