ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-571
source: miRBase, original name: ptr-mir-571 (MI0012567)
SEQUENCE & STRUCTURE| miRNA TGAGTTGGCCATCTGAGCGAG miRNA* AGCTCAGTGTGCCATTTCCTT mismatches: 5 bulges: 2 |
pre-miRNA
CCTCAGTAAGACCAAGCTCAGTGTGCCATTTCCTTGTCTGTAGCCATGTCTATGGGCTCTTGAGTTGGCCATCTGAGCGAGGGCCTGCTTAT
dot-bracket secondary structure
....((((.(.((..((((((((.((((.(((...((((((((......))))))))....))).)))))).))))))...))).))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CCTCAGTAAGACCAAGCTCAGTGTGCCATTTCCTTGTCTGTAGCCATGTCTATGGGCTCTTGAGTTGGCCATCTGAGCGAGGGCCTGCTTAT
dot-bracket secondary structure
....((((.(.((..((((((((.((((.(((...((((((((......))))))))....))).)))))).))))))...))).))))...
SIMILARITIES| miRBase hsa-mir-571: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
