ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-577
source: miRBase, original name: ptr-mir-577 (MI0008788)
SEQUENCE & STRUCTURE| miRNA TAGATAAAATATTGGTACCTG miRNA* GGTTTCAATACTTTATCTGCT mismatches: 2 bulges: 0 |
pre-miRNA
GGGGGAGTGAAGAGTAGATAAAATATTGGTACCTGATGAATCTGAGGCCAGGTTTCAATACTTTATCTGCTCTTCATTTCCCCATATCTACTTAC
dot-bracket secondary structure
((((((((((((((((((((((.((((((.(((((.............))))).)))))).))))))))))))))))))))))............
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGGGGAGTGAAGAGTAGATAAAATATTGGTACCTGATGAATCTGAGGCCAGGTTTCAATACTTTATCTGCTCTTCATTTCCCCATATCTACTTAC
dot-bracket secondary structure
((((((((((((((((((((((.((((((.(((((.............))))).)))))).))))))))))))))))))))))............
SIMILARITIES| miRBase hsa-mir-577: 5e-49 PMRD no hits microPC no hits | UniProt no hits RFAM mir-577: 3e-38 |
Identical with: hsa-mir-577 from miRBase (MNEST028891) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
