ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-581
source: miRBase, original name: ptr-mir-581 (MI0008791)
SEQUENCE & STRUCTURE| miRNA TCTTGTGTTCTCTAGATCAGT miRNA* GATCTAAAGAACACAAAGAAT mismatches: 2 bulges: 1 |
pre-miRNA
TTATGTGAAGGTATTCTTGTGTTCTCTAGATCAGTGCTTTTAGGAAATTTGTGTGATCTAAAGAACACAAAGAATACCTACACAGAACCACCTGC
dot-bracket secondary structure
...((((.(((((((((((((((((.(((((((.(((.............)))))))))).))))))).)))))))))).))))...........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TTATGTGAAGGTATTCTTGTGTTCTCTAGATCAGTGCTTTTAGGAAATTTGTGTGATCTAAAGAACACAAAGAATACCTACACAGAACCACCTGC
dot-bracket secondary structure
...((((.(((((((((((((((((.(((((((.(((.............)))))))))).))))))).)))))))))).))))...........
SIMILARITIES| miRBase hsa-mir-581: 1e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-581: 5e-34 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
