ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-582
source: miRBase, original name: ptr-mir-582 (MI0008792)
SEQUENCE & STRUCTURE| miRNA TACAGTTGTTCAACCAGTTACTA miRNA* GTAACTGGTTGAACAACTGAACC mismatches: 4 bulges: 0 |
pre-miRNA
TCTGTGCTCTTTGATTACAGTTGTTCAACCAGTTACTAATCTAACTAATTGTAACTGGTTGAACAACTGAACCCAAAGGGTGCAAAGTAGAAACATT
dot-bracket secondary structure
..((..(((((((....(((((((((((((((((((..............)))))))))))))))))))....)))))))..)).............
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TCTGTGCTCTTTGATTACAGTTGTTCAACCAGTTACTAATCTAACTAATTGTAACTGGTTGAACAACTGAACCCAAAGGGTGCAAAGTAGAAACATT
dot-bracket secondary structure
..((..(((((((....(((((((((((((((((((..............)))))))))))))))))))....)))))))..)).............
SIMILARITIES| miRBase hsa-mir-582: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-582: 1e-31 |
Identical with: hsa-mir-582 from miRBase (MNEST028896) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
