ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-583
source: miRBase, original name: ptr-mir-583 (MI0008793)
SEQUENCE & STRUCTURE| miRNA CAAAGAGGAAGGTCCCATTAC miRNA* ACTGGGACCTACCTCTTTGG mismatches: 2 bulges: 0 |
pre-miRNA
AACTCACACATTAACCAAAGAGGAAGGTCCCATTACTGCAGGGATCTTAGCAGTACTGGGACCTACCTCTTTGG
dot-bracket secondary structure
..............(((((((((.((((((((.(((((((((...))).)))))).)))))))).)))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AACTCACACATTAACCAAAGAGGAAGGTCCCATTACTGCAGGGATCTTAGCAGTACTGGGACCTACCTCTTTGG
dot-bracket secondary structure
..............(((((((((.((((((((.(((((((((...))).)))))).)))))))).)))))))))
SIMILARITIES| miRBase hsa-mir-583: 1e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-583: 3e-28 |
Identical with: hsa-mir-583 from miRBase (MNEST028898) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
