ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-588
source: miRBase, original name: ptr-mir-588 (MI0008797)
SEQUENCE & STRUCTURE| miRNA TTGGCCACAATGGGTTAGAAC miRNA* TCTTACCCACCATGGCCAAAAT mismatches: 4 bulges: 1 |
pre-miRNA
GCTTAGGTACCAATTTGGCCACAATGGGTTAGAACACTATTCCATTGTGTTCTTACCCACCATGGCCAAAATTGGGCCTAAG
dot-bracket secondary structure
.(((((((.((((((((((((...(((((.(((((((.........))))))).)))))...))))).))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCTTAGGTACCAATTTGGCCACAATGGGTTAGAACACTATTCCATTGTGTTCTTACCCACCATGGCCAAAATTGGGCCTAAG
dot-bracket secondary structure
.(((((((.((((((((((((...(((((.(((((((.........))))))).)))))...))))).))))))))))))))
SIMILARITIES| miRBase hsa-mir-588: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-588 from miRBase (MNEST028903) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
