ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-589
source: miRBase, original name: ptr-mir-589 (MI0012568)
SEQUENCE & STRUCTURE| miRNA TGAGAACCATGTCTGCTCTGAG miRNA* CAGAACAAACGCCGGTTCCCAGA mismatches: 4 bulges: 1 |
pre-miRNA
TCCAGCCTGTGCCCAGCAGCCCCTGAGAACCATGTCTGCTCTGAGCTGGGTACTGCCTGTTCAGAACAAACGCCGGTTCCCAGACGCTGCCAGCTGGCC
dot-bracket secondary structure
....(((...((...(((((..(((.(((((.(((.((.(((((((.(((.....)))))))))).)).)))..))))).)))..)))))..)).))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TCCAGCCTGTGCCCAGCAGCCCCTGAGAACCATGTCTGCTCTGAGCTGGGTACTGCCTGTTCAGAACAAACGCCGGTTCCCAGACGCTGCCAGCTGGCC
dot-bracket secondary structure
....(((...((...(((((..(((.(((((.(((.((.(((((((.(((.....)))))))))).)).)))..))))).)))..)))))..)).))).
SIMILARITIES| miRBase hsa-mir-589: 1e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-589: 1e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
