ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-591
source: miRBase, original name: ptr-mir-591 (MI0008799)
SEQUENCE & STRUCTURE| miRNA AGACCATGGGTTCTCATTGT miRNA* CTGTGGACTCCCTGGCTCTGT mismatches: 5 bulges: 2 |
pre-miRNA
TCTTATCAATGAGGCAGACCATGGGTTCTCATTGTAATAGTGTAGAATGTTGGTTAACTGTGGACTCCCTGGCTCTGTCTCAAATCTACTGATT
dot-bracket secondary structure
.........((((((((((((.((((((.((...((((.((.....))....))))..)).)))).)).))).)))))))))............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TCTTATCAATGAGGCAGACCATGGGTTCTCATTGTAATAGTGTAGAATGTTGGTTAACTGTGGACTCCCTGGCTCTGTCTCAAATCTACTGATT
dot-bracket secondary structure
.........((((((((((((.((((((.((...((((.((.....))....))))..)).)))).)).))).)))))))))............
SIMILARITIES| miRBase ppy-mir-591: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ppy-mir-591 from miRBase (MNEST031171) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
