ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-593
source: miRBase, original name: ptr-mir-593 (MI0008801)
SEQUENCE & STRUCTURE| miRNA TGTCTCTGCTGGGGTTTCT miRNA* mismatches: 7 bulges: 7 |
pre-miRNA
CCCCAGAATCTGTCAGGCACCAGCCAGGCATTGCTCAGCCCCTTTCCCTCTGGGGGAGCAAGGAGTGGTGCTGGGTTTGTCTCTGCTGGGGTTTCTCCT
dot-bracket secondary structure
((((((.......((((.((.((((.(((((..(((.(((((((.......))))).))...)))..))))).)))).)).))))))))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCCCAGAATCTGTCAGGCACCAGCCAGGCATTGCTCAGCCCCTTTCCCTCTGGGGGAGCAAGGAGTGGTGCTGGGTTTGTCTCTGCTGGGGTTTCTCCT
dot-bracket secondary structure
((((((.......((((.((.((((.(((((..(((.(((((((.......))))).))...)))..))))).)))).)).))))))))))........
SIMILARITIES| miRBase hsa-mir-593: 5e-49 PMRD no hits microPC no hits | UniProt no hits RFAM mir-593: 1e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
