ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-599
source: miRBase, original name: ptr-mir-599 (MI0008805)
SEQUENCE & STRUCTURE| miRNA GTTGTGTCAGTTTATCAAAC miRNA* TTGATAAGCTGACATGGGACAG mismatches: 0 bulges: 2 |
pre-miRNA
AAAGACATGCTGTCCACAGTGTGTTTGATAAGCTGACATGGGACAGGGATTCTTTTCACTGTTGTGTCAGTTTATCAAACCCATACTTGGATGA
dot-bracket secondary structure
...........(((((.((((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AAAGACATGCTGTCCACAGTGTGTTTGATAAGCTGACATGGGACAGGGATTCTTTTCACTGTTGTGTCAGTTTATCAAACCCATACTTGGATGA
dot-bracket secondary structure
...........(((((.((((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))..
SIMILARITIES| miRBase mml-mir-599: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-599: 7e-36 |
Identical with: ppy-mir-599 from miRBase (MNEST031178) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
