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ABOUT THIS RECORD

ID: MNEST030534
species: Pan troglodytes
miRNA family: mir-600
source: miRBase, original name: ptr-mir-600 (MI0008806)







SEQUENCE & STRUCTURE
miRNA
ACTTACAGACAAGAGCCTTGCTC

miRNA*
GGAAGGCTCTTGTCTGTCAGGCA

mismatches: 4
bulges: 0

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pre-miRNA
AAGTCACGTGCTGTGGCTCCAGCTTCATAGGAAGGCTCTTGTCTGTCAGGCAGTGGAGTTACTTACAGACAAGAGCCTTGCTCAGGCCAGCCCTGCC

dot-bracket secondary structure
.........((.(.((((...((((...((.(((((((((((((((.((............)).))))))))))))))).)).)))).))))).)).


SIMILARITIES
miRBase hsa-mir-600: 3e-50

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-600: 2e-24

Identical with: hsa-mir-600 from miRBase (MNEST028915)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




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