ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-604
source: miRBase, original name: ptr-mir-604 (MI0012571)
SEQUENCE & STRUCTURE| miRNA AGGCTGCGGGATTCAGGAC miRNA* GCTTGACCTTCCACGCTCCTGT mismatches: 2 bulges: 5 |
pre-miRNA
AGAGCATCGTGCTTGACCTTCCACGCTCCTGTGTCCACTAGCAGGCAGGTTTTCTGACACAGGCTGCGGGATTCAGGACAGTGCATCATGGAGA
dot-bracket secondary structure
.((((((.((.(((((...(((.(((.((((((((....(((......)))....))))))))..)))))).))))))).)))).)).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
AGAGCATCGTGCTTGACCTTCCACGCTCCTGTGTCCACTAGCAGGCAGGTTTTCTGACACAGGCTGCGGGATTCAGGACAGTGCATCATGGAGA
dot-bracket secondary structure
.((((((.((.(((((...(((.(((.((((((((....(((......)))....))))))))..)))))).))))))).)))).)).......
SIMILARITIES| miRBase hsa-mir-604: 3e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-604: 8e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
