ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-606
source: miRBase, original name: ptr-mir-606 (MI0012572)
SEQUENCE & STRUCTURE| miRNA AAACTACTAAAAATCAAAGAT miRNA* CCTTGGTTTTTAGTAGTTTTA mismatches: 1 bulges: 0 |
pre-miRNA
TGTATCCTTGGTTTTTAGTAGTTTTACTATGATGAGGTGTGCCATCCACCCCATCATAGTAAACTACTAAAAATCAAAGATACAAGTGCCTGACCA
dot-bracket secondary structure
((((((.(((((((((((((((((.(((((((((.((((.......)))).)))))))))))))))))))))))))).))))))............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGTATCCTTGGTTTTTAGTAGTTTTACTATGATGAGGTGTGCCATCCACCCCATCATAGTAAACTACTAAAAATCAAAGATACAAGTGCCTGACCA
dot-bracket secondary structure
((((((.(((((((((((((((((.(((((((((.((((.......)))).)))))))))))))))))))))))))).))))))............
SIMILARITIES| miRBase ppy-mir-606: 1e-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ppy-mir-606 from miRBase (MNEST031185) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
