ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-610
source: miRBase, original name: ptr-mir-610 (MI0008810)
SEQUENCE & STRUCTURE| miRNA TGAGCTAAATGTGTGCTGGGA miRNA* CCAGCAAATATACTTTGGAATTATACATATGCTTTTGGGGTAAGGGGATCACATTTAGCTCACA mismatches: 0 bulges: 43 |
pre-miRNA
CTATTTGTCTTAGGTGAGCTAAATGTGTGCTGGGACACATTGAGCCAAATGTCCCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATGGCTTCT
CAATTTTTACACTCCCAGCAAATATACTTTGGAATTATACATATGCTTTTGGGGTAAGGGGATCACATTTAGCTCACATAAGAAAAATGGACTCTAGT
dot-bracket secondary structure
((((((.(((((.((((((((((((((((((((((...(((((((((..(((.....................................)))))))...)
))))........))))))))....(((((..(((.(((....))).)))..))))).......)))))))))))))).))))).))))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CTATTTGTCTTAGGTGAGCTAAATGTGTGCTGGGACACATTGAGCCAAATGTCCCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATGGCTTCT
CAATTTTTACACTCCCAGCAAATATACTTTGGAATTATACATATGCTTTTGGGGTAAGGGGATCACATTTAGCTCACATAAGAAAAATGGACTCTAGT
dot-bracket secondary structure
((((((.(((((.((((((((((((((((((((((...(((((((((..(((.....................................)))))))...)
))))........))))))))....(((((..(((.(((....))).)))..))))).......)))))))))))))).))))).))))))........
SIMILARITIES| miRBase hsa-mir-610: 1e-20 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
