ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-621
source: miRBase, original name: ptr-mir-621 (MI0008819)
SEQUENCE & STRUCTURE| miRNA GGCTAGCAACAGCGCTTACCT miRNA* GGTAGGTGGTGCTGCTGTGCTCT mismatches: 2 bulges: 2 |
pre-miRNA
AGATTGAGGAAGGGGCTGAGTGGTAGGTGGTGCTGCTGTGCTCTGATGAAGACCCATGTGGCTAGCAACAGCGCTTACCTTTTGTCTCTGGGTCC
dot-bracket secondary structure
.......(((((((((.(((.((((((((.((.(((((.(((...(((......)))..)))))))).)).))))))))))).))))))...)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGATTGAGGAAGGGGCTGAGTGGTAGGTGGTGCTGCTGTGCTCTGATGAAGACCCATGTGGCTAGCAACAGCGCTTACCTTTTGTCTCTGGGTCC
dot-bracket secondary structure
.......(((((((((.(((.((((((((.((.(((((.(((...(((......)))..)))))))).)).))))))))))).))))))...)))
SIMILARITIES| miRBase hsa-mir-621: 1e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-621: 4e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
