ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-622
source: miRBase, original name: ptr-mir-622 (MI0008820)
SEQUENCE & STRUCTURE| miRNA ACAGTCTGCTGAGGTTGGAGC miRNA* ATTGGTCTCAGCAGATTGAAG mismatches: 4 bulges: 0 |
pre-miRNA
GAGAAGCTGGACAAGTATTGGTCTCAGCAGATTGAAGAGAGCACCACAGTGGTCATCACACAGTCTGCTGAGGTTGGAGCTGCTAAGATGACGCT
dot-bracket secondary structure
.......(((...(((.((..(((((((((((((..((((.(((....))).)).))...)))))))))))))..)).))).)))..........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GAGAAGCTGGACAAGTATTGGTCTCAGCAGATTGAAGAGAGCACCACAGTGGTCATCACACAGTCTGCTGAGGTTGGAGCTGCTAAGATGACGCT
dot-bracket secondary structure
.......(((...(((.((..(((((((((((((..((((.(((....))).)).))...)))))))))))))..)).))).)))..........
SIMILARITIES| miRBase hsa-mir-622: 4e-40 PMRD no hits microPC no hits | UniProt sp|P05783|K1C18_HUMAN: 0.00000006 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
