ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-623
source: miRBase, original name: ptr-mir-623 (MI0012573)
SEQUENCE & STRUCTURE| miRNA TCCCTTGCAGGGGCTGTTGGGT miRNA* CCGATGTACTCTGTAGATG mismatches: 3 bulges: 3 |
pre-miRNA
GTACACAGTAGAAGCGTCCCTTGCAGGGGCTGTTGGGTTGCATCCTAAGCTGTGCTGGAGCTTCCCGATGTACTCTGTAGATGTCTTTGCACCTTCTG
dot-bracket secondary structure
.......(((((..((((...(((((((..(((((((..((.(((..(((...))))))))..)))))))..)))))))))))..)))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GTACACAGTAGAAGCGTCCCTTGCAGGGGCTGTTGGGTTGCATCCTAAGCTGTGCTGGAGCTTCCCGATGTACTCTGTAGATGTCTTTGCACCTTCTG
dot-bracket secondary structure
.......(((((..((((...(((((((..(((((((..((.(((..(((...))))))))..)))))))..)))))))))))..)))))........
SIMILARITIES| miRBase hsa-mir-623: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
