ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-627
source: miRBase, original name: ptr-mir-627 (MI0008823)
SEQUENCE & STRUCTURE| miRNA GTGAGTCTCTAAGAAAAGAGGA miRNA* CTCTTTTCTTTGAGACTCACTA mismatches: 1 bulges: 0 |
pre-miRNA
TACTTATTACTGGTAGTGAGTCTCTAAGAAAAGAGGAGGTGGTTGTTTTCCTCCTCTTTTCTTTGAGACTCACTACCAATAATAAGAAATACTACT
dot-bracket secondary structure
..(((((((.((((((((((((((.((((((((((((((..(....)..)))))))))))))).)))))))))))))).)))))))..........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TACTTATTACTGGTAGTGAGTCTCTAAGAAAAGAGGAGGTGGTTGTTTTCCTCCTCTTTTCTTTGAGACTCACTACCAATAATAAGAAATACTACT
dot-bracket secondary structure
..(((((((.((((((((((((((.((((((((((((((..(....)..)))))))))))))).)))))))))))))).)))))))..........
SIMILARITIES| miRBase hsa-mir-627: 1e-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-627 from miRBase (MNEST028943) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
