ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-936
source: miRBase, original name: ptr-mir-936 (MI0008883)
SEQUENCE & STRUCTURE| miRNA ACAGTAGAGGGAGGAATCGCAG miRNA* GAGAGACCTTGCTTCTACTTTACCAGGTCC mismatches: 3 bulges: 8 |
pre-miRNA
TCAAGGCCACTGGGACAGTAGAGGGAGGAATCGCAGAAATCACTCCAGGAGCAACTGAGAGACCTTGCTTCTACTTTACCAGGTCCTGCTGGCCCAG
dot-bracket secondary structure
....(((((..(((((((((((((((((..((.(((...((.(....)))....))).))..)))).)))))))).......)))))..)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TCAAGGCCACTGGGACAGTAGAGGGAGGAATCGCAGAAATCACTCCAGGAGCAACTGAGAGACCTTGCTTCTACTTTACCAGGTCCTGCTGGCCCAG
dot-bracket secondary structure
....(((((..(((((((((((((((((..((.(((...((.(....)))....))).))..)))).)))))))).......)))))..)))))...
SIMILARITIES| miRBase hsa-mir-936: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-936: 3e-44 |
Identical with: hsa-mir-936 from miRBase (MNEST029035) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
