ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-940
source: miRBase, original name: ptr-mir-940 (MI0008887)
SEQUENCE & STRUCTURE| miRNA AAGGCAGGGCCCCCGCTCCCC miRNA* CCCCTGGAGCGGGGCCTGGGCAGCCC mismatches: 4 bulges: 7 |
pre-miRNA
TGAGGTGTGGGCCCGGCCCCTGGAGCGGGGCCTGGGCAGCCCCGTGTGATGAGGAAGGAAGGCAGGGCCCCCGCTCCCCGGGCCTGACCCCAC
dot-bracket secondary structure
((.(((.(((((((((.....((((((((((((..((..((((.........))..))...)).))).))))))))))))))))))))).)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGAGGTGTGGGCCCGGCCCCTGGAGCGGGGCCTGGGCAGCCCCGTGTGATGAGGAAGGAAGGCAGGGCCCCCGCTCCCCGGGCCTGACCCCAC
dot-bracket secondary structure
((.(((.(((((((((.....((((((((((((..((..((((.........))..))...)).))).))))))))))))))))))))).)).
SIMILARITIES| miRBase hsa-mir-940: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-940: 5e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
