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ABOUT THIS RECORD

ID: MNEST030627
species: Pan troglodytes
miRNA family: mir-942
source: miRBase, original name: ptr-mir-942 (MI0008888)







SEQUENCE & STRUCTURE
miRNA
TCTTCTCTGTTTTGGCCATGTG

miRNA*
CATGGCCGAAACAGAGAAGTTA

mismatches: 1
bulges: 0

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pre-miRNA
ATTAGGAGAGTATCTTCTCTGTTTTGGCCATGTGTGTACTCACAGCCCCTCACACATGGCCGAAACAGAGAAGTTACTTTCCTAA

dot-bracket secondary structure
.(((((((((((.(((((((((((((((((((((((..............))))))))))))))))))))))).)))))))))))


SIMILARITIES
miRBase hsa-mir-942: 4e-43

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-942: 3e-32

Identical with: hsa-mir-942 from miRBase (MNEST029044)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




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