ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1182
source: miRBase, original name: ptr-mir-1182 (MI0008416)
SEQUENCE & STRUCTURE| miRNA GAGGGTCTTGGGAGGGATGTGAC miRNA* CTCCTCCCTCTCCAGCAGCGACTGGATTCTG mismatches: 2 bulges: 8 |
pre-miRNA
GGGACTTGTCACTGCCTGTCTCCTCCCTCTCCAGCAGCGACTGGATTCTGGAGTCCATCTAGAGGGTCTTGGGAGGGATGTGACTGTTGGGAAGCC
dot-bracket secondary structure
.((.(((.(((..((..(((.(.((((((.((((....((((...(((((((.....))))))))))))))))))))).).))).))))).)))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGGACTTGTCACTGCCTGTCTCCTCCCTCTCCAGCAGCGACTGGATTCTGGAGTCCATCTAGAGGGTCTTGGGAGGGATGTGACTGTTGGGAAGCC
dot-bracket secondary structure
.((.(((.(((..((..(((.(.((((((.((((....((((...(((((((.....))))))))))))))))))))).).))).))))).)))))
SIMILARITIES| miRBase hsa-mir-1182: 1e-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-1182 from miRBase (MNEST029051) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
