ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1183
source: miRBase, original name: ptr-mir-1183 (MI0008417)
SEQUENCE & STRUCTURE| miRNA CACTGTAGGTGATGGTGAGAGTGGGCA miRNA* ACACAGAACATTAGAGAAGACAGGAGT mismatches: 12 bulges: 2 |
pre-miRNA
TTATTCAAATGCTCGGAGACACAGAACATTAGAGAAGACAGGAGTTCACTGTAGGTGATGGTGAGAGTGGGCATGGAGCAGGAGTGCC
dot-bracket secondary structure
.(((((...(((((.(.(.(((....(((((..(...((((.......))))...)..)))))...)))..).).))))).)))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TTATTCAAATGCTCGGAGACACAGAACATTAGAGAAGACAGGAGTTCACTGTAGGTGATGGTGAGAGTGGGCATGGAGCAGGAGTGCC
dot-bracket secondary structure
.(((((...(((((.(.(.(((....(((((..(...((((.......))))...)..)))))...)))..).).))))).)))))..
SIMILARITIES| miRBase hsa-mir-1183: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1183: 2e-36 |
Identical with: hsa-mir-1183 from miRBase (MNEST029052) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
