ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1184
source: miRBase, original name: ptr-mir-1184 (MI0008418)
SEQUENCE & STRUCTURE| miRNA CCTGCAGCGACTTGATGGCTTCC miRNA* AGGTGGTTCTGCTCAGCAGTCAACAGTG mismatches: 2 bulges: 11 |
pre-miRNA
CTTGCAGAACGAGGTGAAGGAGGTGGTTCTGCTCAGCAGTCAACAGTGGCCACATCTCCACCTGCAGCGACTTGATGGCTTCCGTGTCCTTTTCGTGG
dot-bracket secondary structure
.(..(.(((.((((....((((((.(((.((((..((((......((((........))))))))))))....))).))))))....))))))))..)
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CTTGCAGAACGAGGTGAAGGAGGTGGTTCTGCTCAGCAGTCAACAGTGGCCACATCTCCACCTGCAGCGACTTGATGGCTTCCGTGTCCTTTTCGTGG
dot-bracket secondary structure
.(..(.(((.((((....((((((.(((.((((..((((......((((........))))))))))))....))).))))))....))))))))..)
SIMILARITIES| miRBase hsa-mir-1184-1: 8e-51 PMRD no hits microPC no hits | UniProt sp|P23610|F8I2_HUMAN: 0.00000000001 RFAM no hits |
Identical with: hsa-mir-1184-1 from miRBase (MNEST029053) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
