ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-154
source: miRBase, original name: ptr-mir-1185-2 (MI0008420)
SEQUENCE & STRUCTURE| miRNA AGAGGATACCCTTTGTATGTT miRNA* TATACAGGGGGAGACTCTCA mismatches: 2 bulges: 1 |
pre-miRNA
TTGGTACTTAAAGAGAGGATACCCTTTGTATGTTCACTTGATTAATGGCGAATATACAGGGGGAGACTCTCATTTGCGTATCAAA
dot-bracket secondary structure
(((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TTGGTACTTAAAGAGAGGATACCCTTTGTATGTTCACTTGATTAATGGCGAATATACAGGGGGAGACTCTCATTTGCGTATCAAA
dot-bracket secondary structure
(((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))).
SIMILARITIES| miRBase hsa-mir-1185-2: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 7e-39 |
Identical with: hsa-mir-1185-2 from miRBase (MNEST029057) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
