ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1208
source: miRBase, original name: ptr-mir-1208 (MI0008430)
SEQUENCE & STRUCTURE| miRNA TCACTGTTCAGACAGGCGGA miRNA* TCGCCCTCTGATGAGTCACC mismatches: 5 bulges: 2 |
pre-miRNA
ACCGGCAGAATCACTGTTCAGACAGGCGGAGACGGGTCTTTCTCGCCCTCTGATGAGTCACCACTGTGGTGG
dot-bracket secondary structure
((((.(((....(((..(((((..((((((((......)))).)))).)))))..))).....)))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ACCGGCAGAATCACTGTTCAGACAGGCGGAGACGGGTCTTTCTCGCCCTCTGATGAGTCACCACTGTGGTGG
dot-bracket secondary structure
((((.(((....(((..(((((..((((((((......)))).)))).)))))..))).....)))))))..
SIMILARITIES| miRBase hsa-mir-1208: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1208: 2e-26 |
Identical with: hsa-mir-1208 from miRBase (MNEST029068) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
