ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1224
source: miRBase, original name: ptr-mir-1224 (MI0006309)
SEQUENCE & STRUCTURE| miRNA GTGAGGACTCGGGAGGTGGAGGGT miRNA* CCCCCACCTCCTCTCTCCTCAG mismatches: 6 bulges: 0 |
pre-miRNA
GTGAGGACTCGGGAGGTGGAGGGTGGTGCCGCCGGGGCCGGGCGCTGTTTCAGCTCGCTTCTCCCCCCACCTCCTCTCTCCTCAG
dot-bracket secondary structure
.((((((...(((((((((.(((.((.((..(((....)))..((((...))))..)).)).))).)))))))))...)))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC, Mol Cell. 28:328-336(2007)., "Mammalian mirtron genes"
GTGAGGACTCGGGAGGTGGAGGGTGGTGCCGCCGGGGCCGGGCGCTGTTTCAGCTCGCTTCTCCCCCCACCTCCTCTCTCCTCAG
dot-bracket secondary structure
.((((((...(((((((((.(((.((.((..(((....)))..((((...))))..)).)).))).)))))))))...)))))).
SIMILARITIES| miRBase hsa-mir-1224: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1224: 7e-42 |
Identical with: hsa-mir-1224 from miRBase (MNEST029070) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC, Mol Cell. 28:328-336(2007)., "Mammalian mirtron genes"
