ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1225
source: miRBase, original name: ptr-mir-1225 (MI0008432)
SEQUENCE & STRUCTURE| miRNA TGAGCCCCTGTGCCGCCCCCA miRNA* GGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGA mismatches: 2 bulges: 31 |
pre-miRNA
GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCA
dot-bracket secondary structure
.((((.....))))..((((((((.((((...((((((((((...))))))))))..(((((.....))).)))))).).)).))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCA
dot-bracket secondary structure
.((((.....))))..((((((((.((((...((((((((((...))))))))))..(((((.....))).)))))).).)).))))).
SIMILARITIES| miRBase mml-mir-1225: 6e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1225: 1e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
