ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1226
source: miRBase, original name: ptr-mir-1226 (MI0006314)
SEQUENCE & STRUCTURE| miRNA TCACCAGCCCTGTGTTCCCTAG miRNA* AGGGCATGCAGGCCTGGATGGGG mismatches: 4 bulges: 1 |
pre-miRNA
GGTGAGGGCATGCAGGCCTGGATGGGGCAGCTGGGATGGTCCAAAAGGGTGGCCTCACCAGCCCTGTGTTCCCTAG
dot-bracket secondary structure
)...((((.(((((((.((((.((((((.(((.((.....)).....))).)))))))))).))))))).))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC, Mol Cell. 28:328-336(2007)., "Mammalian mirtron genes"
GGTGAGGGCATGCAGGCCTGGATGGGGCAGCTGGGATGGTCCAAAAGGGTGGCCTCACCAGCCCTGTGTTCCCTAG
dot-bracket secondary structure
)...((((.(((((((.((((.((((((.(((.((.....)).....))).)))))))))).))))))).))))..
SIMILARITIES| miRBase mml-mir-1226: 3.0E-37 PMRD no hits microPC no hits | UniProt no hits RFAM 6mir-1226: 6.0E-36 |
Identical with: hsa-mir-1226 from miRBase (MNEST029073), ppy-mir-1226 from miRBase , mml-mir-1226 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC, Mol Cell. 28:328-336(2007)., "Mammalian mirtron genes"
