ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1227
source: miRBase, original name: ptr-mir-1227 (MI0008433)
SEQUENCE & STRUCTURE| miRNA CGTGCCACCCTTTTCCCCA miRNA* GGGCCAGGCGGTGGTGGGCA mismatches: 5 bulges: 1 |
pre-miRNA
GTGGGGCCAGGCGGTGGTGGGCACTGCTGGGGTGGGCACAGCAGCCATGCAGAGCAGGCATTTGACCCCGTGCCACCCTTTTCCCCA
dot-bracket secondary structure
.(((((..(((.(((((((((((..((((..(....).)))).(((.(((...))))))...)).)))...)))))))))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GTGGGGCCAGGCGGTGGTGGGCACTGCTGGGGTGGGCACAGCAGCCATGCAGAGCAGGCATTTGACCCCGTGCCACCCTTTTCCCCA
dot-bracket secondary structure
.(((((..(((.(((((((((((..((((..(....).)))).(((.(((...))))))...)).)))...)))))))))..)))))
SIMILARITIES| miRBase hsa-mir-1227: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1227: 4e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
