ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1233
source: miRBase, original name: ptr-mir-1233-3 (MI0008436)
SEQUENCE & STRUCTURE| miRNA TGAGCCCTGTCCTCCCGCAG miRNA* GTGGGAGGCAGTGCACGGCAGG mismatches: 4 bulges: 4 |
pre-miRNA
TGAGTGGGAGGCAGTGCACGGCAGGGGGAGCTGCAGGGCCGTCGGAGGGGCCCCAGCGTCTGAGCCCTGTCCTCCCGCAG
dot-bracket secondary structure
...(((((((((((.((....((((....((((..(((((........))))))))).)))).)).))).))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGAGTGGGAGGCAGTGCACGGCAGGGGGAGCTGCAGGGCCGTCGGAGGGGCCCCAGCGTCTGAGCCCTGTCCTCCCGCAG
dot-bracket secondary structure
...(((((((((((.((....((((....((((..(((((........))))))))).)))).)).))).))))))))..
SIMILARITIES| miRBase ptr-mir-1233-2: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
